RTCA
Open-source toolkit to analyse data from xCELLigence System (RTCA)
Bioconductor version: 2.10
Import, analyze and visualize data from Roche(R) xCELLigence RTCA systems. The package imports real-time cell electrical impedance data into R. As an alternative to commercial software shipped along the system, the Bioconductor package RTCA provides several unique transformation (normalization) strategies and various visualization tools.
Author: Jitao David Zhang
Maintainer: Jitao David Zhang <davidvonpku at gmail.com>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("RTCA")
To cite this package in a publication, start R and enter:
citation("RTCA")
Documentation
| R Script | Introduction to Data Analysis of the Roche xCELLigence System with RTCA Package | |
| R Script | RTCAtransformation: Discussion of transformation methods of RTCA data | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | CellBasedAssays, Infrastructure, Software, TimeCourse, Visualization |
| Depends | methods,stats,graphics,Biobase,RColorBrewer, gtools |
| Imports | |
| Suggests | xtable |
| System Requirements | |
| License | LGPL-3 |
| URL | http://code.google.com/p/xcelligence/, http://www.xcelligence.roche.com/, http://www.nextbiomotif.com/Home/scientific-programming |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.8.0 |
| Since | Bioconductor 2.5 (R-2.10) |
Package Downloads
| Package Source | RTCA_1.8.0.tar.gz |
| Windows Binary | RTCA_1.8.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | RTCA_1.8.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!
Contact us: [email protected]
Hosting provided by Fred Hutchinson Cancer Research Center
Copyright © 2003 - 2012
