To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RCytoscape")

In most cases, you don't need to download the package archive at all.

RCytoscape

Display and manipulate graphs in Cytoscape

Bioconductor version: 2.14

Interactvive viewing and exploration of graphs, connecting R to Cytoscape.

Author: Paul Shannon

Maintainer: Paul Shannon <pshannon at fhcrc.org>

Citation (from within R, enter citation("RCytoscape")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RCytoscape")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RCytoscape")

biocViews	GraphAndNetwork, Software, ThirdPartyClient, Visualization
Version	1.14.0
In Bioconductor since	BioC 2.7 (R-2.12)
License	GPL-2
Depends	R (>= 2.14.0), graph(>= 1.31.0), XMLRPC (>= 0.2.4)
Imports	methods, XMLRPC, BiocGenerics
Suggests	RUnit
System Requirements
URL	http://rcytoscape.systemsbiology.net
Depends On Me
Imports Me	categoryCompare, NCIgraph, RamiGO
Suggests Me	clipper, GeneNetworkBuilder, graphite, mmnet, NetPathMiner

Follow Installation instructions to use this package in your R session.

Common Bioconductor workflows include:

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