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source("http://bioconductor.org/biocLite.R")
biocLite("cobindR")

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cobindR

Finding Co-occuring motifs of transcription factor binding sites

Bioconductor version: 2.14

Finding and analysing co-occuring motifs of transcription factor binding sites in groups of genes

Author: Manuela Benary, Stefan Kroeger, Yuehien Lee, Robert Lehmann

Maintainer: Manuela Benary <manuela.benary at cms.hu-berlin.de>

Citation (from within R, enter citation("cobindR")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("cobindR")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cobindR")

biocViews	CellBiology, ChIPSeq, MultipleComparison, SequenceMatching, Software
Version	1.2.0
In Bioconductor since	BioC 2.13 (R-3.0)
License	Artistic-2.0
Depends
Imports	yaml, seqinr, Biostrings, biomaRt, BSgenome, methods, gmp, mclust, rtfbs, gplots, IRanges
Suggests	RUnit, BiocGenerics
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

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