To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("domainsignatures")
In most cases, you don't need to download the package archive at all.
Bioconductor version: 2.14
Find significantly enriched gene classifications in a list of functionally undescribed genes based on their InterPro domain structure.
Author: Florian Hahne, Tim Beissbarth
Maintainer: Florian Hahne <florian.hahne at novartis.com>
Citation (from within R,
enter citation("domainsignatures")
):
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("domainsignatures")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("domainsignatures")
R Script | Gene set enrichment using InterPro domain signatures | |
Reference Manual |
biocViews | Annotation, GeneSetEnrichment, Pathways, Software |
Version | 1.24.0 |
In Bioconductor since | BioC 2.3 (R-2.8) |
License | Artistic-2.0 |
Depends | R (>= 2.4.0), KEGG.db, prada, biomaRt, methods |
Imports | AnnotationDbi |
Suggests | |
System Requirements | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me |
Follow Installation instructions to use this package in your R session.
Package Source | domainsignatures_1.24.0.tar.gz |
Windows Binary | domainsignatures_1.24.0.zip (32- & 64-bit) |
Mac OS X 10.6 (Snow Leopard) | domainsignatures_1.24.0.tgz |
Mac OS X 10.9 (Mavericks) | domainsignatures_1.24.0.tgz |
Browse/checkout source | (username/password: readonly) |
Package Downloads Report | Download Stats |
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