To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("rBiopaxParser")

In most cases, you don't need to download the package archive at all.

rBiopaxParser

Parses BioPax files and represents them in R

Bioconductor version: 2.14

Parses BioPAX files and represents them in R, at the moment BioPAX level 2 and level 3 are supported.

Author: Frank Kramer

Maintainer: Frank Kramer <dev at frankkramer.de>

Citation (from within R, enter citation("rBiopaxParser")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("rBiopaxParser")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rBiopaxParser")

biocViews	DataRepresentation, Software
Version	2.2.0
In Bioconductor since	BioC 2.12 (R-3.0)
License	GPL (>= 2)
Depends	R (>= 3.0.0), data.table
Imports	XML
Suggests	Rgraphviz, RCurl, graph, RUnit, BiocGenerics, nem, RBGL
System Requirements
URL	https://github.com/frankkramer/rBiopaxParser
Depends On Me
Imports Me
Suggests Me	NetPathMiner

Follow Installation instructions to use this package in your R session.

Common Bioconductor workflows include:

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