| print {siggenes} | R Documentation |
Prints the numbers of differentially expressed genes and the estimated FDRs for a set of possible values for the fudge factor in an Empirical Bayes Analysis of Microarrays.
print(x, delta = NULL)
x |
a FindA0 object |
delta |
a numeric value between 0 and 1 specifying the minimum posterior probability
for a gene to be called differentially expressed.
If NULL, the value of delta
is used that has been specified when generating the FindA0 object specified
by x |
Holger Schwender, [email protected]
Efron, B., Tibshirani, R., Storey, J.D. and Tusher, V. (2001). Empirical Bayes Analysis of a Microarray Experiment, JASA, 96, 1151-1160.
Schwender, H., Krause, A. and Ickstadt, K. (2003). Comparison of the Empirical Bayes and the Significance Analysis of Microarrays. Technical Report, SFB 475, University of Dortmund, Germany.