matter

DOI: 10.18129/B9.bioc.matter    

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see matter.

A framework for rapid prototyping with file-based data structures

Bioconductor version: 3.15

Memory-efficient reading, writing, and manipulation of structured binary data as file-based vectors, matrices, arrays, lists, and data frames.

Author: Kylie A. Bemis <k.bemis at northeastern.edu>

Maintainer: Kylie A. Bemis <k.bemis at northeastern.edu>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("matter")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("matter")

 

PDF	R Script	matter: Rapid prototyping with data on disk
PDF	R Script	matter: Supplementary 1 - Simulations and comparative benchmarks
PDF	R Script	matter: Supplementary 2 - 3D mass spectrometry imaging case study
PDF		Reference Manual
Text		NEWS

Details

biocViews	DataRepresentation, Infrastructure, Software
Version	1.22.0
In Bioconductor since	BioC 3.4 (R-3.3) (6 years)
License	Artistic-2.0
Depends	R (>= 3.5), BiocParallel, Matrix, methods, stats, biglm
Imports	BiocGenerics, ProtGenerics, digest, irlba, utils
LinkingTo
Suggests	BiocStyle, testthat
SystemRequirements
Enhances
URL	https://github.com/kuwisdelu/matter
Depends On Me
Imports Me	Cardinal
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	matter_1.22.0.tar.gz
Windows Binary	matter_1.22.0.zip
macOS Binary (x86_64)	matter_1.22.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/matter
Source Repository (Developer Access)	git clone [email protected]:packages/matter
Package Short Url	https://bioconductor.org/packages/matter/
Package Downloads Report	Download Stats