R: SAM specific print method

print {siggenes}

R Documentation

SAM specific print method

Description

Prints the statistics (FDR, number of differentially expressed genes etc.) for an object of class SAM

Usage

  print(x, delta = NULL, n.digits = 3)

Arguments

`x`	a SAM object
`delta`	a numeric value or vector specifying one or a set of Deltas for which statistics as the number of differentially expressed genes and the estimated FDR should be plotted. If `NULL` the Delta values of `x` will be used
`n.digits`	an integer specifying the number of decimal places in the output

Note

SAM was deveoped by Tusher et al. (2001).

!!! There is a patent pending for the SAM technology at Stanford University. !!!

Author(s)

Holger Schwender, [email protected]

References

Tusher, V.G., Tibshirani, R., and Chu, G. (2001). Significance analysis of microarrays applied to the ionizing radiation response. PNAS, 98, 5116-5121.