minfiDataEPIC
Example data for the Illumina Methylation EPIC array
Bioconductor version: Release (3.19)
Data from 3 technical replicates of the cell line GM12878 from the EPIC methylation array.
Author: Jean-Philippe Fortin, Kasper Daniel Hansen
Maintainer: Kasper Daniel Hansen <kasperdanielhansen at gmail.com>
Citation (from within R, enter
citation("minfiDataEPIC")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("minfiDataEPIC")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual | |
| NEWS | Text |
Details
| biocViews | ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData |
| Version | 1.30.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.5.0), minfi(>= 1.21.2), IlluminaHumanMethylationEPICmanifest, IlluminaHumanMethylationEPICanno.ilm10b2.hg19 |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | MethylAid, REMP, minfi, recountmethylation, MethylAidData |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | minfiDataEPIC_1.30.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/minfiDataEPIC |
| Source Repository (Developer Access) | git clone [email protected]:packages/minfiDataEPIC |
| Package Short Url | https://bioconductor.org/packages/minfiDataEPIC/ |
| Package Downloads Report | Download Stats |