BridgeDbR

DOI: 10.18129/B9.bioc.BridgeDbR    

Code for using BridgeDb identifier mapping framework from within R

Bioconductor version: Release (3.6)

Use BridgeDb functions and load identifier mapping databases in R.

Author: Christ Leemans <christleemans at gmail.com>, Egon Willighagen <egon.willighagen at gmail.com>, Anwesha Bohler <anweshabohler at gmail.com>, Lars Eijssen <l.eijssen at maastrichtuniversity.nl>

Maintainer: Egon Willighagen <egon.willighagen at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BridgeDbR")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BridgeDbR")

 

PDF	R Script	tutorial
PDF		Reference Manual
Text		NEWS

Details

biocViews	Annotation, Software
Version	1.12.0
In Bioconductor since	BioC 3.0 (R-3.1) (3.5 years)
License	AGPL-3
Depends	R (>= 3.3.0), rJava
Imports	RCurl
LinkingTo
Suggests	testthat
SystemRequirements
Enhances
URL	https://github.com/bridgedb/BridgeDb https://github.com/BiGCAT-UM/bridgedb-r
BugReports	https://github.com/BiGCAT-UM/bridgedb-r/issues
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BridgeDbR_1.12.0.tar.gz
Windows Binary	BridgeDbR_1.12.0.zip
Mac OS X 10.11 (El Capitan)	BridgeDbR_1.12.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/BridgeDbR
Package Short Url	http://bioconductor.org/packages/BridgeDbR/
Package Downloads Report	Download Stats