CNVtools

DOI: 10.18129/B9.bioc.CNVtools    

A package to test genetic association with CNV data

Bioconductor version: Release (3.6)

This package is meant to facilitate the testing of Copy Number Variant data for genetic association, typically in case-control studies.

Author: Chris Barnes <christopher.barnes at imperial.ac.uk> and Vincent Plagnol <vincent.plagnol at cimr.cam.ac.uk>

Maintainer: Chris Barnes <christopher.barnes at imperial.ac.uk>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CNVtools")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CNVtools")

 

PDF	R Script	Copy Number Variation Tools
PDF		Reference Manual

Details

biocViews	GeneticVariability, Software
Version	1.72.0
In Bioconductor since	BioC 2.5 (R-2.10) (8.5 years)
License	GPL-3
Depends	R (>= 2.10), survival
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	CNVtools_1.72.0.tar.gz
Windows Binary	CNVtools_1.72.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	CNVtools_1.72.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/CNVtools
Package Short Url	http://bioconductor.org/packages/CNVtools/
Package Downloads Report	Download Stats