chopsticks

DOI: 10.18129/B9.bioc.chopsticks    

The snp.matrix and X.snp.matrix classes

Bioconductor version: Release (3.6)

Implements classes and methods for large-scale SNP association studies

Author: Hin-Tak Leung <htl10 at users.sourceforge.net>

Maintainer: Hin-Tak Leung <htl10 at users.sourceforge.net>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("chopsticks")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("chopsticks")

 

PDF	R Script	snpMatrix
PDF		Reference Manual

Details

biocViews	GeneticVariability, Microarray, SNP, SNPsAndGeneticVariability, Software
Version	1.42.0
In Bioconductor since	BioC 2.8 (R-2.13) (7 years)
License	GPL-3
Depends	R (>= 2.10.0), survival, methods
Imports
LinkingTo
Suggests	hexbin
SystemRequirements
Enhances
URL	http://outmodedbonsai.sourceforge.net/
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	chopsticks_1.42.0.tar.gz
Windows Binary	chopsticks_1.42.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	chopsticks_1.42.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/chopsticks
Package Short Url	http://bioconductor.org/packages/chopsticks/
Package Downloads Report	Download Stats