flowBin

DOI: 10.18129/B9.bioc.flowBin    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see flowBin.

Combining multitube flow cytometry data by binning

Bioconductor version: 3.8

Software to combine flow cytometry data that has been multiplexed into multiple tubes with common markers between them, by establishing common bins across tubes in terms of the common markers, then determining expression within each tube for each bin in terms of the tube-specific markers.

Author: Kieran O'Neill

Maintainer: Kieran O'Neill <koneill at bccrc.ca>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("flowBin")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowBin")

 

PDF	R Script	flowBin
PDF		Reference Manual
Text		NEWS

Details

biocViews	CellBasedAssays, FlowCytometry, ImmunoOncology, Software
Version	1.18.1
In Bioconductor since	BioC 2.14 (R-3.1) (5 years)
License	Artistic-2.0
Depends	methods, flowCore, flowFP, R (>= 2.10)
Imports	class, limma, snow, BiocGenerics
LinkingTo
Suggests	parallel
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowBin_1.18.1.tar.gz
Windows Binary	flowBin_1.18.1.zip
Mac OS X 10.11 (El Capitan)	flowBin_1.18.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowBin
Source Repository (Developer Access)	git clone [email protected]:packages/flowBin
Package Short Url	http://bioconductor.org/packages/flowBin/
Package Downloads Report	Download Stats