netresponse

DOI: 10.18129/B9.bioc.netresponse    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see netresponse.

Functional Network Analysis

Bioconductor version: 3.8

Algorithms for functional network analysis. Includes an implementation of a variational Dirichlet process Gaussian mixture model for nonparametric mixture modeling.

Author: Leo Lahti, Olli-Pekka Huovilainen, Antonio Gusmao and Juuso Parkkinen

Maintainer: Leo Lahti <leo.lahti at iki.fi>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("netresponse")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual
Text		NEWS

Details

biocViews	CellBiology, Clustering, DifferentialExpression, GeneExpression, Genetics, GraphAndNetwork, Microarray, Network, Software, Transcription
Version	1.42.0
In Bioconductor since	BioC 2.7 (R-2.12) (8.5 years)
License	GPL (>=2)
Depends	R (>= 2.15.1), Rgraphviz, methods, minet, mclust, reshape2
Imports	dmt, ggplot2, graph, igraph, parallel, plyr, qvalue, RColorBrewer
LinkingTo
Suggests
SystemRequirements
Enhances
URL	https://github.com/antagomir/netresponse
BugReports	https://github.com/antagomir/netresponse/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	netresponse_1.42.0.tar.gz
Windows Binary	netresponse_1.42.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	netresponse_1.42.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/netresponse
Source Repository (Developer Access)	git clone [email protected]:packages/netresponse
Package Short Url	http://bioconductor.org/packages/netresponse/
Package Downloads Report	Download Stats