DonaPLLP2013

DOI: 10.18129/B9.bioc.DonaPLLP2013    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see DonaPLLP2013.

Supplementary data package for Dona et al. (2013) containing example images and tables

Bioconductor version: 3.8

An experiment data package associated with the publication Dona et al. (2013). Package contains runnable vignettes showing an example image segmentation for one posterior lateral line primordium, and also the data table and code used to analyze tissue-scale lifetime-ratio statistics.

Author: Erika Dona, Joseph D. Barry, Guillaume Valentin, Charlotte Quirin, Anton Khmelinskii, Andreas Kunze, Sevi Durdu, Lionel R. Newton, Ana Fernandez-Minan, Wolfgang Huber, Michael Knop, Darren Gilmour

Maintainer: Joseph D. Barry <joseph.barry at embl.de>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("DonaPLLP2013")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DonaPLLP2013")

 

PDF	R Script	PLLP image analysis
PDF	R Script	PLLP tissue-scale ratio statistics
PDF		Reference Manual

Details

biocViews	ExperimentData, Tissue
Version	1.20.0
License	Artistic-2.0
Depends	EBImage, parallel
Imports
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	DonaPLLP2013_1.20.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/DonaPLLP2013
Source Repository (Developer Access)	git clone [email protected]:packages/DonaPLLP2013
Package Short Url	http://bioconductor.org/packages/DonaPLLP2013/
Package Downloads Report	Download Stats