WES.1KG.WUGSC

DOI: 10.18129/B9.bioc.WES.1KG.WUGSC    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see WES.1KG.WUGSC.

Whole Exome Sequencing (WES) of chromosome 22 401st to 500th exon from the 1000 Genomes (1KG) Project by the Washington University Genome Sequencing Center (WUGSC).

Bioconductor version: 3.8

The assembled .bam files of whole exome sequencing data from the 1000 Genomes Project. 46 samples sequenced by the Washington University Genome Sequencing Center are included.

Author: Yuchao Jiang, Nancy R. Zhang

Maintainer: Yuchao Jiang <yuchaoj at wharton.upenn.edu>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("WES.1KG.WUGSC")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("WES.1KG.WUGSC")

 

PDF		Using CODEX
PDF		Reference Manual
Text		NEWS

Details

biocViews	DNASeqData, ExperimentData, Homo_sapiens_Data, Project1000genomes, SequencingData
Version	1.14.0
License	GPL-2
Depends
Imports
LinkingTo
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URL
Depends On Me
Imports Me
Suggests Me	CODEX, iCNV
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	WES.1KG.WUGSC_1.14.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/WES.1KG.WUGSC
Source Repository (Developer Access)	git clone [email protected]:packages/WES.1KG.WUGSC
Package Short Url	http://bioconductor.org/packages/WES.1KG.WUGSC/
Package Downloads Report	Download Stats