LiquidAssociation

DOI: 10.18129/B9.bioc.LiquidAssociation    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see LiquidAssociation.

LiquidAssociation

Bioconductor version: 3.9

The package contains functions for calculate direct and model-based estimators for liquid association. It also provides functions for testing the existence of liquid association given a gene triplet data.

Author: Yen-Yi Ho <yho at jhsph.edu>

Maintainer: Yen-Yi Ho <yho at jhsph.edu>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("LiquidAssociation")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("LiquidAssociation")

 

PDF	R Script	LiquidAssociation Vignette
PDF		Reference Manual

Details

biocViews	CellBiology, GeneExpression, Genetics, Network, Pathways, Software, TimeCourse
Version	1.38.0
In Bioconductor since	BioC 2.5 (R-2.10) (10 years)
License	GPL (>=3)
Depends	geepack, methods, yeastCC, org.Sc.sgd.db
Imports	Biobase, graphics, grDevices, methods, stats
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me	fastLiquidAssociation
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	LiquidAssociation_1.38.0.tar.gz
Windows Binary	LiquidAssociation_1.38.0.zip
Mac OS X 10.11 (El Capitan)	LiquidAssociation_1.38.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/LiquidAssociation
Source Repository (Developer Access)	git clone [email protected]:packages/LiquidAssociation
Package Short Url	https://bioconductor.org/packages/LiquidAssociation/
Package Downloads Report	Download Stats