maanova

DOI: 10.18129/B9.bioc.maanova    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see maanova.

Tools for analyzing Micro Array experiments

Bioconductor version: 3.9

Analysis of N-dye Micro Array experiment using mixed model effect. Containing analysis of variance, permutation and bootstrap, cluster and consensus tree.

Author: Hao Wu, modified by Hyuna Yang and Keith Sheppard with ideas from Gary Churchill, Katie Kerr and Xiangqin Cui.

Maintainer: Keith Sheppard <keith.sheppard at jax.org>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("maanova")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("maanova")

 

PDF		R/maanova HowTo
PDF		Reference Manual

Details

biocViews	Clustering, DifferentialExpression, Microarray, Software
Version	1.54.0
In Bioconductor since	BioC 1.7 (R-2.2) (14 years)
License	GPL (>= 2)
Depends	R (>= 2.10)
Imports	Biobase, graphics, grDevices, methods, stats, utils
LinkingTo
Suggests	qvalue, snow
SystemRequirements
Enhances	Rmpi
URL	http://research.jax.org/faculty/churchill
Depends On Me
Imports Me
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	maanova_1.54.0.tar.gz
Windows Binary	maanova_1.54.0.zip
Mac OS X 10.11 (El Capitan)	maanova_1.54.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/maanova
Source Repository (Developer Access)	git clone [email protected]:packages/maanova
Package Short Url	https://bioconductor.org/packages/maanova/
Package Downloads Report	Download Stats