ELMER.data

DOI: 10.18129/B9.bioc.ELMER.data    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see ELMER.data.

Data for the ELMER package

Bioconductor version: 3.9

Supporting data for the ELMER package. It includes: - elmer.data.example.promoter: mae.promoter - elmer.data.example: data - EPIC.hg38.manifest - EPIC.hg19.manifest - hm450.hg38.manifest - hm450.hg19.manifest - hocomoco.table - human.TF - LUSC_meth_refined: Meth - LUSC_RNA_refined: GeneExp - Probes.motif.hg19.450K - Probes.motif.hg19.EPIC - Probes.motif.hg38.450K - Probes.motif.hg38.EPIC - TF.family - TF.subfamily - Human_genes__GRCh37_p13 - Human_genes__GRCh38_p12 - Human_genes__GRCh37_p13__tss - Human_genes__GRCh38_p12__tss

Author: Tiago Chedraoui Silva, Lijing Yao Simon Coetzee, Benjamin P. Berman

Maintainer: Tiago Chedraoui Silva <tiagochst at usp.br>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ELMER.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ELMER.data")

 

HTML	R Script	ELMER.data: Supporting data for the ELMER package
PDF		Reference Manual

Details

biocViews	AssayDomainData, ExperimentData, OrganismData, TechnologyData
Version	2.8.1
License	GPL-3
Depends	R (>= 3.5.0)
Imports	GenomicRanges
LinkingTo
Suggests	BiocStyle, knitr, dplyr, devtools, DT
SystemRequirements
Enhances
URL
Depends On Me	ELMER
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ELMER.data_2.8.1.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/ELMER.data
Source Repository (Developer Access)	git clone [email protected]:packages/ELMER.data
Package Short Url	https://bioconductor.org/packages/ELMER.data/
Package Downloads Report	Download Stats